Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLCTARLVGLQLLISCCWAFACHSTESSPDFTLPGDYLLAGLFPLHSGCLQVRHRPEVTLCDRSCSFNE-HGYHLFQAMRLGVEEINNSTALLPNITLGYQLYDVCSDSANVYATLRVLSL-----PGQHHIELQGDLLHYSPTVLAVIGPDSTNRAATTAALLSPFLVPMISYAASSETLSVKRQYPSFLRTIPNDKYQVETMVLLLQKFGWTWISLVGSSDDYGQLGVQALENQATGQGICIAFKDIMPFSAQVGDERMQ----CLMRHLAQA-GATVVVVFSSRQLARVFFESVVLTNLTGKVWVASEAWALSRHITGVPGIQRIGMVLGVAIQKRAVPGLKAFEEAYARADKKAPRPCHKGSW----------CSSNQLCRECQAFMAHTMPKLKAFSMSSAYN-AYRAVYAVAHGLHQLLGC----ASGACSRGRVYPWQLLEQIHKVHFLLHKDTVAFNDNR------------DPLSSYNIIAWDWNGPKWTFTVLGSSTWSPVQLNINETKIQWHGKDNQVPKSVCSSDCLEGHQRVVTGFHHCCFECVPCGAGTFLNKSDLYRCQPCGKEEWAPEGSQTCFPRTVVFLALREHTSWVLLAANTLLLLLLLGTAGLFAWHLDTPVVRSAGGRLCFLMLGSLAAGSGSLYGFFGEPTRPACLLRQALFALGFTIFLSCLTVRSFQLIIIFKFSTKVPTFYHAWVQNHGAGLFVMISSAAQLLICLTWLVVWTPLPAREYQRFPHLVMLECTETNSLGFILAFLYNGLLSISAFACSYLGKDLPENYNEAKCVTFSLLFNFVSWIAFFTTASVYDGKYLPAANMMAGLSSLSSGFGGYFLPKCYVILCRPDLNSTEHFQASIQDYTRRCGST |
| 2E4U Chain:A ((8-539)) | ------------------------------EIKIEGDLVLGGLFPINEKGTGTEE------CGR---INEDRGIQRLEAMLFAIDEINKDNYLLPGVKLGVHILDTCS--RDTYALEQSLEFVRASL---------IPLL-----IAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEILRFFNWTYVSTVASEGDYGETGIEAFEQEARLRNICIA------TAEKVGRSNIRKSYDSVIRELLQKPNARVVVLFMRSDDSRELIAAANRVNASF-TWVASDGWGAQESI--VKGSEHVA--YGAITLELASHPVRQFDRYFQSLN---PYNNHRNPWFRDFWEQKFQCSLQ------QVCDKHLAIDSSNYEQESKIMFVVNAVYAMAHALHKMQRTLCPQTTKLCDAMKILDGK---KLYKEYLLKIQFTAPFNPNKGADSIVKFDTFGDGMGRYNVFNLQQTGGKYSYLKVGH--WAET-LSLDVDSIHW--SRNSVPTSQCSDPCAPNEMKNMQPGDVCCWICIPCEPYEYL--VDEFTCMDCGPGQWPTADLSGCYNLPE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -362602 for 3964 contacts (-91.5/contact) +
2D Compatibility (PS) -50573 + (NN) -24761 + (LL) 27572
1D Compatibility (HY) -30800 + (ID) 7400
Total energy: -448564.0 ( -113.16 by residue)
QMean score : 0.469
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