Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MALTPESPSSFPGLAATGSSVPEPPGGPNATLNSSWASPTEPSSLEDLVATGTIGTLLSAMGVVGVVGNAYTLVVTCRSLRAVASMYVYVVNLALADLLYLLSIPFIVATYVTKEWHFGDVGCRVLFGLDFLTMHASIFTLTVMSSERYAAVLRPLDTVQ-RPKGYRKLLALGTWLLALLLTLPVMLAMRLVRRGPKSLCL-----PAWGPRAHRAYLTLLFATSIAGPGLLIGLLYARLARAYRRSQRAS-FKRARRPGARALRLVLGIVLLFWACFLPFWL----WQLLAQYHQAPLAPRTARIVNYLTTC--LTYGNSCANPFLYTLLTRNYRDHLRGRVRGPGSGGGRGPVPSLQPRARFQRCSGRSLSSCSPQPTDSLVLAPAAPARPAPEGPRAPA |
4N6H Chain:A ((128-412)) | -----------------------------------------------------ITALYSAVCAVGLLGNVLVMFGIVRYTKMKTATNIYIFNLALADALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMVMAVTRPRDGAVVCMLQFPSPSWYWDTVTKICVFLFAFVV--PILIITVCYGLMLLRLRSVRLLSGSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPL------VVAALHLCIALGYANSSLNPVLYAFLDENFKRCFRQLCRKPCG------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212881 for 2042 contacts (-104.3/contact) +
2D Compatibility (PS) -27966 + (NN) -8911 + (LL) 1740
1D Compatibility (HY) -28800 + (ID) 4550
Total energy: -281368.0 ( -137.79 by residue)
QMean score : 0.365
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