Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLMASTTSAVPGHPSLPSLPSNSSQERPLDTRDPLLARAELALLSIVFVAVALSNGLVLAALARRGRRGHWAPIHVFIGHLCLADLAVALFQVLPQLAWKATDRFRG----PDALCRAVKYLQMVGMYASSYMILAMTLDRHRAICRPMLAYRHGSGAHWNRPVLVAWAFSLLLSLPQLFIFAQRNVEGGSGVTDCWACFAEP---WGRRTYVTWIALMVFVAPTLGIAACQVLIFREIHA-SLVPGPSERPGGRRRGRRTGSPGEGAHVSAAVAKTVRMTLVIVVVYVLCWAPF--FLVQLWAAWDPEAPLEGAPFVLLMLLASLNSCTNPWIYASFSSSVSSELRSLLCCARGRTPPSLGPQDESCTTASSSLAKDTSS |
| 4EA3 Chain:A ((141-405)) | ----------------------------------------------------LGNCLVMYVILRHTKMKTATNIYIF--NLALADTLVLL-----TLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVP-VAIMGSAQVEDEE--IECLVEIPTPQDYWGP-VFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRR-------------------ITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFR---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181888 for 1789 contacts (-101.7/contact) +
2D Compatibility (PS) -25757 + (NN) -10028 + (LL) 6216
1D Compatibility (HY) -24800 + (ID) 3800
Total energy: -240057.0 ( -134.19 by residue)
QMean score : 0.203
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