Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLGSLGLWALLPTAVEAPPNRRTCVFFEAPGVRGSTKTLGELLDTGTELPRAIRCLYSRCCFGIWNLTQDRAQVEMQGCRDSDEPGCESLHCDPSPRAHPSPGSTLFTCSCGTDFCNANYSHLPPPGSPGTPGSQGPQAAPGESIWMALVLLGLFLLLLLLLGSIILALLQRKNYRVRGEPVPEPRPDSGRDWSVELQELPELCFSQVIREGGHAVVWAGQLQGKLVAIKAFPPRSVAQFQAERALYELPGLQHDHIVRFITASRGGPGRLLSGPLLVLELHPKGSLCHYLTQYTSDWGSSLRMALSLAQGLAFLHEER-WQNGQ-YKPGIAHRDLSSQNVLIREDGSCAIGDLGLALVL-PGLTQPPAWTPTQPQGPAAIMEAGTQRYMAPELLDKTLDLQDWGMALRRADIYSLALLLWEILSRCPDLRPDSSPPPFQLAYEAELGNTPTSDELWALAVQERRRPYIPSTWRCFATDPDGLREL---LEDCWDADPEARLTAECVQQRLAALAHPQESHPFPESCPRGCPPLCPEDCTSIPAPTILPCRPQRSACHFSVQQGPCSRNPQPACTLSPV |
2QLU Chain:A ((21-308)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSN-LEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPG--KPPGDTHGQ---------VGTRRYMAPEVLEGAINFQR--DAFLRIDMYAMGLVLWELVSRCK--AADGPVDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHW----LKHPGLAQLCVTIEECWDHDAEARLSAGCVEERVSLIRRS-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -145383 for 2297 contacts (-63.3/contact) +
2D Compatibility (PS) -30577 + (NN) -21902 + (LL) 11928
1D Compatibility (HY) -25600 + (ID) 5500
Total energy: -217034.0 ( -94.49 by residue)
QMean score : 0.459
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