Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCRDELSNVQVCAPLLLPGAVNPAANSNCCAALQATNKDCLCNAL-----R-A------ATTLTSLCNLPSFDCGISA
2RKN Chain:A ((3-72))
DLCGMSQDELNECKPAVSKENP-TSPSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLA--------
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26892 for 359 contacts (-74.9/contact) +
2D Compatibility (PS) -5806 + (NN) -2659 + (LL) 152
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -38355.0 ( -106.84 by residue)
QMean score : 0.424
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: