Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--EDCTVDLKGLIRECKQYVMFPASPKITPSSACCSVVQKVNSPCLCSKVTKEIEKVVCMDKVVYVADYYKNPLKPGSDCGSYHVPSQRR
2RKN Chain:A ((1-77))
AIDLCGMSQDEL-NECKPAVSKENPTS--PSQPCCTALQHADFACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC----------
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19438 for 520 contacts (-37.4/contact) +
2D Compatibility (PS) -7512 + (NN) -2861 + (LL) 740
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -31171.0 ( -59.94 by residue)
QMean score : 0.272
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: