Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-QCDPEQLVACASPIFYGTAPSESCCSNLREQQKEGCLCQYAKDPMYASYVNNTNARKTIAACGIPIPSC-
1L6H Chain:A ((1-69))
AGCNAGQLTVCTGAIAGGARPTAACCSSLRAQQG--CFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTCH
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38793 for 502 contacts (-77.3/contact) +
2D Compatibility (PS) -6726 + (NN) -3807 + (LL) -68
1D Compatibility (HY) -6000 + (ID) 1700
Total energy: -57094.0 ( -113.73 by residue)
QMean score : 0.335
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: