Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCSPAQLSSCVSAITSSTPPSKLCCSKIKEQKPCLCQYLKNPNLQKFINTPNARKVASTCGTPFPKC-
1L6H Chain:A ((1-69))
AGCNAGQLTVCTGAIAGGARPTAACCSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTCH
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32402 for 515 contacts (-62.9/contact) +
2D Compatibility (PS) -7088 + (NN) -7377 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -53017.0 ( -102.95 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: