Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACAATTSLLA-CLPATQSDIMPSATCCTQLSSYVA--NNG----QDCLCSASTSNT---ARSDLALKLPQKCNLKFK----AGTTCNVIPGGQ
1SIY Chain:A ((3-90))
-CGQVQGNLAQCIGFLQKGGVVPPSCCTGVKNILNSSRTTADRRAVCSCLKAAAGAVRGINPNNAEALPGKCGVNIPYKISTSTNCNSI----
General information:
TITO was launched using:
RESULT:
Template:
1SIY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28704 for 489 contacts (-58.7/contact) +
2D Compatibility (PS) -7369 + (NN) -476 + (LL) -220
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -42519.0 ( -86.95 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_1SIY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIY-query.scw
PDB file :
Tito_Scwrl_1SIY.pdb
: