Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ACSLSQVRTCTSAVIAPNQMPSQQCCSELSAITDFNCFCSMLLNQGTNLNQDYIN--NALLIPSKCGEQGRNLRGQRCGNYAIP
1N89 Chain:A ((1-63))
ACQASQLAVCASAILSG-AKPSGECCGNLRAQ-Q-GCFCQYAKDP--TYGQ-YIRSPHARDTLTSCGLA---------------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26792 for 374 contacts (-71.6/contact) +
2D Compatibility (PS) -6139 + (NN) -1117 + (LL) 184
1D Compatibility (HY) -3200 + (ID) 1100
Total energy: -38164.0 ( -102.04 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: