Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QREPAKCGSSDAGSVLMPCFAFLE-QQSREPSARCCSAVANSTQKEPPRCLCVFLDQLARAM---NRTQPLQLPSLCGDARLTAERCKGLFVANRFA
2RKN Chain:A ((1-77))
--AIDLCGMS--QDELNECKPAVSKENPTSPSQPCCTALQHAD----FACLCGYKNSPWLGSFGVDPELASALPKQCGLANAP--TC----------
General information:
TITO was launched using:
RESULT:
Template:
2RKN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26050 for 476 contacts (-54.7/contact) +
2D Compatibility (PS) -7277 + (NN) -895 + (LL) 1516
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -34856.0 ( -73.23 by residue)
QMean score : 0.180
(partial model without unconserved sides chains):
PDB file :
Tito_2RKN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2RKN-query.scw
PDB file :
Tito_Scwrl_2RKN.pdb
: