Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ADCKEERRVAINACKPILY-GKDPTPACCERIRVTHIECVCPVIT-PKLAALVDVNRMVRLIEGCGRNVPRHYKCGSITTP
1L6H Chain:A ((1-69))
AGCNAGQ---LTVCTGAIAGGARPTAACCSSLR-AQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALP---TCH-----
General information:
TITO was launched using:
RESULT:
Template:
1L6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22946 for 499 contacts (-46.0/contact) +
2D Compatibility (PS) -6721 + (NN) -1238 + (LL) 1004
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -34801.0 ( -69.74 by residue)
QMean score : 0.037
(partial model without unconserved sides chains):
PDB file :
Tito_1L6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L6H-query.scw
PDB file :
Tito_Scwrl_1L6H.pdb
: