Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VITCPDTDITLTACLSYVAYPNPPPPQPCCDAVLDVTAQARTREDRQAVCSCLKGLMIGIPGLDL-TALAALPKVCGANI--GYEISPGMDCSKIN
1BWO Chain:A ((1-90))
-IDCGHVDSLVRPCLSYVQGGP-GPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIHNLN-EDNARSIPPKCG--VNLPYTISLNIDCSRV-
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69555 for 592 contacts (-117.5/contact) +
2D Compatibility (PS) -9126 + (NN) -3688 + (LL) 212
1D Compatibility (HY) -6800 + (ID) 1800
Total energy: -90757.0 ( -153.31 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: