Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLQRNFLIWLLASLFYAYQYILRVIPNIIAPELITKFNISIADIGQFGGLYYIGYTFAHIPVGFALDRFGPKFVLPICVVLTFVGTLPLIYFDEWYYLTFSRIIVGVGSSASAIGIFKIASTYFSQKKSAKMASLSIIVGLLGAIYGGL-PLNFLFNKFGWDYVIYAFSTFGCLLALLLFFITPNNSTE--KNVSGNVFQDLKTVLFNKHIILISFFSGLMVGPLEGFADGWAKAFLCEVYQMTGDLASLLSSLIFIGMGAGSFFLAYFLERHPNRHYEAIIACSLAMIASFLLLFAQAGGLYVVLPTLLIIGFASGYQVIAIYKAISYVDNSLVGLTTAVSNMIIMVFGYFFHTGIAKIVDLCWDRTVIQGNPVYGSELLIKAISIIPICLLLAVFWFVWLKKRS
3WDO Chain:A ((44-217))---------------------------------------SEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIWGIILGRALQGSGAIAAAV-MALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPI--ITHKLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLNFGIMCLHMLLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRKMKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAGYKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPPYVSSLRIEIPADIAANE


General information:
TITO was launched using:
RESULT:

Template: 3WDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111446 for 1104 contacts (-100.9/contact) +
2D Compatibility (PS) -17222 + (NN) 1619 + (LL) 4312
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: -131187.0 ( -118.83 by residue)
QMean score : -0.043

(partial model without unconserved sides chains):
PDB file : Tito_3WDO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WDO-query.scw
PDB file : Tito_Scwrl_3WDO.pdb: