Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFNSLLVFDIETIPDVNSCRNLLNISDDSSLKEKRNALTKYHLEITNGQNPFLRQPFHQVIVISFLLCSVTYQSNYEVFTLQEIRSEGTLD------------------SSEKELVKGFFNCVSEKKPRLIS-FNGRTFDIPVLKYRAMVHDVQAEYFHKAG---DKWNSYNQRYSSNWHCDLLESLSDFGAFARVKMNEVCAVFNLPGKIGVDGSQVVDLYDSGRIQEIRDYCETDVVNTYLIYLRFMHHQGRITTRSYNKNIEELLLECEKKAHLRKFKEEWEITCGGRFCVEFK |
4PTF Chain:A ((280-497)) | ------------------------IEDTRKIAFADPVVMAFDIETTKPPLKFPDSAVDQIMMISYMIDGEGF-----LITNREIISEDIEDFEYTPKPEYPGFFTIFNENDEVALLQRFFEHIRDVRPTVISTFNGDFFDWPFIHNRSKIHGL--DMFDEIGFAPDAEGEYKSSYCSHMDCFRWVKRDSYLPQGSQGLKAVTQSKLGYNPIELD-PELMTPYAFEKPQHLSEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYQHNILLPNKHTD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PTF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84731 for 1455 contacts (-58.2/contact) +
2D Compatibility (PS) -20527 + (NN) -5116 + (LL) 1912
1D Compatibility (HY) -14000 + (ID) 2400
Total energy: -124862.0 ( -85.82 by residue)
QMean score : 0.314
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