Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFNSLLVFDIETIPDVNSCRNLLNISDDSSLKEKRNALTKYHLEITNGQNPFLRQPFHQVIVISFLLCSVTYQSNYEVFTLQEIRSEGTLD------------------SSEKELVKGFFNCVSEKKPRLIS-FNGRTFDIPVLKYRAMVHDVQAEYFHKAG---DKWNSYNQRYSSNWHCDLLESLSDFGAFARVKMNEVCAVFNLPGKIGVDGSQVVDLYDSGRIQEIRDYCETDVVNTYLIYLRFMHHQGRITTRSYNKNIEELLLECEKKAHLRKFKEEWEITCGGRFCVEFK
4PTF Chain:A ((280-497))------------------------IEDTRKIAFADPVVMAFDIETTKPPLKFPDSAVDQIMMISYMIDGEGF-----LITNREIISEDIEDFEYTPKPEYPGFFTIFNENDEVALLQRFFEHIRDVRPTVISTFNGDFFDWPFIHNRSKIHGL--DMFDEIGFAPDAEGEYKSSYCSHMDCFRWVKRDSYLPQGSQGLKAVTQSKLGYNPIELD-PELMTPYAFEKPQHLSEYSVSDAVATYYLYMKYVHPFIFSLCTIIPLNPDETLRKGTGTLCEMLLMVQAYQHNILLPNKHTD


General information:
TITO was launched using:
RESULT:

Template: 4PTF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84731 for 1455 contacts (-58.2/contact) +
2D Compatibility (PS) -20527 + (NN) -5116 + (LL) 1912
1D Compatibility (HY) -14000 + (ID) 2400
Total energy: -124862.0 ( -85.82 by residue)
QMean score : 0.314

(partial model without unconserved sides chains):
PDB file : Tito_4PTF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PTF-query.scw
PDB file : Tito_Scwrl_4PTF.pdb: