Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNFCKIIYGNNDNQLSEKSYKSSVCNDDLFNGNE---EDFVILENEKMYKTKAEFESEGYKII
4LCV Chain:A ((83-128))
--------YGITDEDMIRKTLRISVCDEDKFRHNEFIGETRVPLKKLKPNHTKTFSICLEKQ--
General information:
TITO was launched using:
RESULT:
Template:
4LCV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 13109 for 164 contacts (79.9/contact) +
2D Compatibility (PS) -4095 + (NN) 3309 + (LL) 996
1D Compatibility (HY) -1200 + (ID) 850
Total energy: 11269.0 ( 68.71 by residue)
QMean score : 0.108
(partial model without unconserved sides chains):
PDB file :
Tito_4LCV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LCV-query.scw
PDB file :
Tito_Scwrl_4LCV.pdb
: