Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKFTYTRTALASLLTLCSFSGFAADSFNEGMKGVKKQENIKSITTSEKMEVMKTSNKRLKEKMDRICNADPRKKAEELKKKEELKLAAEKKKEELAEKKRKETKLASEKKAKPLDAKNSNVESSKTRGTETQKA--RDVKKNFKKDVKIVGQNAEKKGEASPVIL----VGGVDVIDTNQGTSGLKITFGGVVDAQGYGKAGPSGEDYKHYNVMSGKSTGYYEDISDKVKG-ANPIFPSGIGNIGDYSEDIDMIADAILHLRAEDKNEDKGLLYGADVQFQVPVTEGKGASQGVRATRGRSAHVFLSSRYGDLKLGYQFGPEALMRLDATRIATIDGAADSDWFRKVNLEGSAASFPFYVTPRLYTESFSSESEKLSFRMAGKYHKNVMTTLPFRFAYYSPNYMGARFGVSYSPRYDSNLFVIKDGDNIKHVGPDYEHIVSAGASYEYDFSERKVKVKVAAVGEYGQAKEPDSTKYAYKEYVEYNDLMGVNLGISADCNINEDQGVKFAASFAYLGKSGQPKGIEKLVGNVYQKIDGKGVTDDDKRVKELEDQFKGDDKNTMYWTAGAGYQHENFYISLTYFGSKMSDGDKLHDVAFGIQYDLSPASSKGKFVPYASLHYFKTDEKQGGGYKITKKDSSGIAPSNQGVLFLTGMKFSF |
| 4YNT Chain:A ((224-399)) | ----------------------------------------------------------------------------------------------------RKNLHLLENTTANRLFWKNGSAEEAIADGVEITSADGKVTRVHAKKEV-IISAGALR----SPLILELSGVGNPTILKKNNITPRVDLPTVGE-NLQDQFNNGMAGEGY---GVLAGASTVTYPSISDVFGNETDSIVASLRSQLSDYAAATVKVSNG--HMKQEDLERLYQLQFDLIVKDKVPIAEILFHPGGGNAVSSEFWGLLPFARGNIHISSNDPTAPAAINPNYFMFEWDGKSQAGIAKYIRKILRSAPLNKLIAKETKPGLSEIPATAADEKWVEWLKANYRSNFHPVGTAAMMPRSIGGVVDNRLRVYGTSNVRVVDASVLPFQVCGHLVSTLYAVAERASDLIKEDAKSA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YNT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 20792 for 892 contacts (23.3/contact) +
2D Compatibility (PS) -16349 + (NN) 10139 + (LL) 19700
1D Compatibility (HY) -6800 + (ID) 2500
Total energy: 24982.0 ( 28.01 by residue)
QMean score : 0.089
|
|
|