Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIVWYELTLFGVLTHIISNVFFPSESDYLSTIKFLGSFAVGFGFRPLGAFIFGYIGDKYGRRKVLLTSVILVSISSTAIAVIPDFKEIGILSPILLLLCRIVQGTAAGGETSINSAFLIEHSSDKKDLGFLGSMKAFSGALGSITCFLMIAIVKKFTGENY---EIWGWRLLFYFCSIMGVIGFLTRYIMEESLAYKTHDQNKSLSNSPFLELIRSYKKAFMIAIGLGIAQNAIVYSAIMFYNISVKELILSGIDIKNVVRITVEITFGTSAVLFAILSDKVGRKNVMVLILIALACAGLPAFSLLSYDNHYIVTLTFLLISIPIGASFGIYNSLVCELLPTKVRCTGFSLAHNISAGIFGGISPSICMWLIEKTETELAAGFYLTMCALISLIYVLQIKTEDKKVDW |
| 4LDS Chain:A ((57-199)) | ----------------------------------------------VGAGSSGPLADKLGRRRLVMLIAIVFIIGALILAASTNLA--------LLIIGRLIIGLAVGGSMSTVPVYLSEMAPTEYR-GSLGSLNQLMITIGILAAYLV----------NYAFADIEGWRWMLGLAVVPSVILLVGIYFMPESPRWLLENRNEEAARQVMKITYDDSEIDKELKEMKEINAISESTWTVIKSPWLGRILIVGCIFAIFQQFIGINAVIFYSSSIFAKAGLGEAASILGSVGIGTINVLVTIVAIFVVDKIDRKKLLVGGNIGMIASLLIMAILIWTIGIASSAWIIIVCLSLFIVFFGISWGPVLWVMLPELFPMRARGAATGISALVLNIGTLIVSLFFPILSDALS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LDS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50542 for 963 contacts (-52.5/contact) +
2D Compatibility (PS) -14345 + (NN) -2349 + (LL) 5104
1D Compatibility (HY) -10400 + (ID) 2000
Total energy: -74532.0 ( -77.40 by residue)
QMean score : 0.153
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