Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFPKKVLGEEWEEGRKFNKLYQKDKQRKLIKRQGILRESQ------NGIQV------YKEDPEIVEIAKPIGKWTQMVMQDGGLMQRLAQLMKRESGRKGFWELFVEAQASTHGKHKGKGR
3IUU Chain:A ((8-83))
-----LVGQIWHEGHSFNPILTREKDFLFLRGEAVLEEARASSTALSGIVKTAEALGYRCVPSISARARPGGAIEQKVFDNIVDEFVQAARMQDFDAICLDLHGATLAEHTLDTEGYLLSR
General information:
TITO was launched using:
RESULT:
Template:
3IUU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 23937 for 390 contacts (61.4/contact) +
2D Compatibility (PS) -6191 + (NN) 3600 + (LL) 328
1D Compatibility (HY) -4400 + (ID) 950
Total energy: 16324.0 ( 41.86 by residue)
QMean score : 0.047
(partial model without unconserved sides chains):
PDB file :
Tito_3IUU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IUU-query.scw
PDB file :
Tito_Scwrl_3IUU.pdb
: