Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQLPILQVIIPIIASMLCFFTRKH--KVSWFISFTTTIVTLFISSVLLIKTYNGETITYHLG----------NWAPPYGI--ELRIDVLNSLILTLVNFVALISVLYSFYINEKEISKNKITGLYSLFLLC-LSGLLGILVTNDIFNLYVFLEISSLSSYVLVSMGKDKKA-----LVAAFEYLISGTIGATFYLLGIGLL----YSTTG--TLNMSDMAERIVPLYNNNIVKLGTLFIFVGLSNKMALFPLSRWLVNSYSEAPSFVSIFFSGTVTKVMIYVFIRIFYTVFHQNFFLLKLPLSNVIIILALCAIVFGSIFAITAKDIRRLFAHSSVSQIGYIILVLSLNSKIALSAAILHIINHSIIKTSLFMVAGCISYKFGTTKIENLSGLKKSMPYIAFAFTLLSLALVGVPLTNGFISKWYIINVIIESHARISLIVFVVGSFLALIYMWKAVEKMYFESDAVSCVEMTSGKTDVPFPMLFCPLFMATLTLVVGVYSNPIRLVVEKLVF |
| 3RKO Chain:M ((1-411)) | MLLPWL-ILIPFIGGFLCWQTERFGVKVPRWIALITMGLTLALSLQLWLQ--GGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAVLCSW----KEIEKYQ--GFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLN--TPM-SSGVEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPLFPNA----SAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFAVATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKSQIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RKO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -411791 for 3315 contacts (-124.2/contact) +
2D Compatibility (PS) -38816 + (NN) -8863 + (LL) 1852
1D Compatibility (HY) -48800 + (ID) 5600
Total energy: -512018.0 ( -154.45 by residue)
QMean score : 0.348
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