Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEVFLNNATKKIEGEYHQSKETNAPVVLILHHHPQYGGSMDSKMIHSIYTSFIDNNFSALKINFRGVGKSTGTFDKGIGELTDAAIAIDWLQEHNPSNVPIWIVGFSFGAWVAMQLTMRRPEIVGFIALSLPATKYDFSFLSPCPVPGLIIQSSNDTISEESDVTELANRLINSVKSDHMEYHIIGDTNHFLRDKEEEVTQIIDNYVKLRLNSAAISSQMVKKEIRIKEYA
2I3D Chain:A ((25-241))
--EVIFNGPAGRLEGRYQPSKEKSAPIAIILHPHPQFGGTMNNQIVYQLFYLFQKRGFTTLRFNFRSIGRSQGEFDHGAGELSDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPEIEGFMSIAPQPNTYDFSFLAPCPSSGLIINGDADKVAPEKDVNGLVEKL-KTQKGILITHRTLPGANHFFNGKVDELMGECEDYLDRRLNGELVPEP------------
General information:
TITO was launched using:
RESULT:
Template:
2I3D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163301 for 1910 contacts (-85.5/contact) +
2D Compatibility (PS) -23814 + (NN) -13595 + (LL) 2148
1D Compatibility (HY) -19200 + (ID) 4500
Total energy: -222262.0 ( -116.37 by residue)
QMean score : 0.577
(partial model without unconserved sides chains):
PDB file :
Tito_2I3D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I3D-query.scw
PDB file :
Tito_Scwrl_2I3D.pdb
: