Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSNNNFLLSYACFPNKTRGRYFKEQEDENRSCFQRDRDRIIHSNAFRKLEYKTQVFINYEHDYYRTRLTHSLEVAQIARSIARRLGLDEDITECIALAHDLGHPPFGHTGENALKRAVQDLNLDNEKYEFDHNVQAIRILTYLEQKHADFDGMNLSWEVVEGVAKHNGPLLGRNAVSYTNNQLLLEYNEKYNLKLEEFSSIEAQVASIADDIAYSVHDLDDELRANLVTIEDLLNIPLIGKTFKDVES----RYSELPQNKLIHESLSRTIGMMISDVVSQTEKNIEDYKIKSVEDVRSLNKMLVTFSPEVANATKEVKKFNMEKIYRSYKLNRTMNKAKRIVEELFQCFYENPRLLPIEWNKLAHKFQRSVVICDYISGMTDRFAIHEHRRIFDTSYEMTSF |
2DQB Chain:A ((16-374)) | ------LAPYAQKARDTRGRAHPEPESLYRTPYQKDRDRILHTTAFRRLEYKTQVLPGWA--YYRTRLTHTLEVAQVSRSIARALGLNEDLTEAIALSHDLGHPPFGHTGEHVLNALMQDHG------GFEHNAQALRILTHLEVRYPGFRGLNLTYEVLEGIATHEA----------------------------GQGTLEAQVVDLSDAIAYAAHDLDDGFRAGLLHPEELKEVELL-QALALEEGLDLLRLPELDRRVLVRQLL----GYFITAAIEATHRRVEEAGVQSAEAVRRHPSRLAALGEEAEKALKALKAFLMERFYRHPEVLRERRKAEAVLEGLFAAYTRYPELLPREVQAKIPEEGLERAVCDYIAGMTDRFALEAYRRLSP-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DQB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156171 for 2966 contacts (-52.7/contact) +
2D Compatibility (PS) -35787 + (NN) -4763 + (LL) 2828
1D Compatibility (HY) -22800 + (ID) 7950
Total energy: -224643.0 ( -75.74 by residue)
QMean score : 0.512
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