Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGAACRGYCRKIYLAIDNVLYAIN-ETMVMWKKELKSLVKGNPTIFNDKLAISTLDDCLYMLDMRMIVQSGPIISPVIMIVTK
3HXJ Chain:A ((73-123))
-----------IYFGSDKV-YAINPDGTEKWRFDT-----SDFTIFEDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPI
General information:
TITO was launched using:
RESULT:
Template:
3HXJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9102 for 150 contacts (-60.7/contact) +
2D Compatibility (PS) -4635 + (NN) 2696 + (LL) 1264
1D Compatibility (HY) -3200 + (ID) 850
Total energy: -13827.0 ( -92.18 by residue)
QMean score : 0.026
(partial model without unconserved sides chains):
PDB file :
Tito_3HXJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HXJ-query.scw
PDB file :
Tito_Scwrl_3HXJ.pdb
: