Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEEKIPKNKQEQLGQPKIPVSSQV-SNTQNNNQQPNLQSENGSKLPIAAASMLAITGIAFRGSYCSLPRNVSSRNSNRGLLSCCYYNPISL
1LRZ Chain:A ((271-316))
---EKRPENKKAH--NKRDNLQQQLDANEQKIEEGKRLQEEHGNELPISAGFFFINPFEVVYYAGGTSNAFRHFAGSYAVQWEMINYALNHG
General information:
TITO was launched using:
RESULT:
Template:
1LRZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14885 for 167 contacts (89.1/contact) +
2D Compatibility (PS) -4481 + (NN) 2635 + (LL) 380
1D Compatibility (HY) -1200 + (ID) 800
Total energy: 11419.0 ( 68.38 by residue)
QMean score : 0.437
(partial model without unconserved sides chains):
PDB file :
Tito_1LRZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LRZ-query.scw
PDB file :
Tito_Scwrl_1LRZ.pdb
: