Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLEYTLTTNSVEVTVLPVYIEEQSIPYENCYVWMYNVKIKNKSLSTIQLLSRHWQIIDYKGKINEIVGAGVIGEQPVIKPGEVFKYTSGTYLNAPSGIMQGKYEFLNEENTKVFEVTIPSFSLDSPYTNIRPH
2F1E Chain:A ((9-121))
-----------VEVEVSPRFLAHQSTPDEGRYAFAYSIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTSGVLLETEQGQMQGHYDMVADDGTE-FIAPIAAFVLS---------
General information:
TITO was launched using:
RESULT:
Template:
2F1E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50273 for 763 contacts (-65.9/contact) +
2D Compatibility (PS) -12505 + (NN) -5053 + (LL) 1152
1D Compatibility (HY) -6000 + (ID) 2350
Total energy: -75029.0 ( -98.33 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_2F1E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F1E-query.scw
PDB file :
Tito_Scwrl_2F1E.pdb
: