Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MISSQI-GSGIFMLPISLAPYGTYSLISWAVSGLGAILLALVFALLCAKFPETGGPHVYVKHAFGPTAAFFVGWTYWASSWVSSTAVIVASIGYLAPLFHNNIQNIRLFLEIALILAI-MLINLRGITTVGHVELLLMTVKITVLFAVPIAALLLFDRNNFVVSEEISNLTISQAFARSTLLTLWCFIGLEIVTASAGSVENPSKTIPRAIVFGTVFVAIIYFINSLAIMGLINGNHLANSKAPYADVIKIILPGNWYLIISIVAFIVSVSSLNAWFLADGQVALGLAKDKLMPQFFAKRNKYGAPFCGIIINTLGILALLVLIS--SKNFAKQVTSIIDVSVVSFLFVYLTCCLAFLKVIIQEKNYYK-----FLIGGMAVLFCCWIIYETPMNTLLIASLFPLSGTPTYLLWYRKPTK |
| 3NCY Chain:A ((18-402)) | MVSGNIMGSGVFLLPANLAATGGIAIYGWLVTIIGALALSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDPLVLTLTCVAVLWIFVLLNIVGPKMITRVQAVATVLALVPIVGIAVFGWFWFKGE-----WNVSGMNTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFAR-----TPVAGLLI--VGVLMTIFQFSSMSPNAAKEFGLVSSVSVIFTLVPYLYTCAALL--LLGHGHFGKARPLYLLITFVAFVYCIWAVIGSGAKEVMWSFVTLMVITALYALNYNRIHK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -408373 for 3234 contacts (-126.3/contact) +
2D Compatibility (PS) -37266 + (NN) -9639 + (LL) 640
1D Compatibility (HY) -33600 + (ID) 5700
Total energy: -493938.0 ( -152.73 by residue)
QMean score : 0.345
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