Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKYTQLFISVIALVISLFAGYKVVKHQPQSVLNIKVAIIDSDKVINESLALHNIQQQIKEQNSKLQQEFENELDKLKPSKEELELLSEEAKKERAEQFNKLALNARDNYTKKMSY---LEESYRDAVDSVFNKIKEVAKKTAEKNNIDLVLFISKKNQVLYSMNEIDLSDVVLKNINKEIPEFTLKGVN |
1HN9 Chain:A ((214-291)) | ----------------------------------KVAVTELAHIVDETLAANNLDR--------------SQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HN9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 30753 for 440 contacts (69.9/contact) +
2D Compatibility (PS) -7785 + (NN) -2085 + (LL) 8144
1D Compatibility (HY) -3600 + (ID) 1200
Total energy: 24227.0 ( 55.06 by residue)
QMean score : 0.179
|
|
|