Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELISNLIHQLGGGIYNFLSFSLIISVIVFVHEYGHYIIAKAYKVKVESFSIGFGPGIFGFYDKSGTRWKLSAIPLGGYVKMLGDNNAANTPIDQQELTEEEKSYSLHTKPRYQKAAIVFAGPFANMIFAIIALTVFFSVVGYYHTPPVIGKVIEGSAAKQAGLLPGDTITQINEYKIKYFEDISRVMMSNPETKIEIKYSRNNEEYSTSLTPLTIEDKDIFGNIIERKTIGITSVNIKELRQSSFFGAVSLSVSETYHTMCLTIKALFQIIVGKRSVNEIGGPIKIAKYSGQSAKKGFIMVLYFMAIISANLAAINLLPIPLLDGGHLFHYIIEAVIRRDLSLKYQKYAATFGASVLFLLMAIAISNDIRHLF |
1LCY Chain:A ((259-325)) | ----------------------------------------------------------------------------------------------------------------------------------------------------LIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRTQSQLAVQIR--RGRETLTLYVTPEVTE------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1LCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -21458 for 402 contacts (-53.4/contact) +
2D Compatibility (PS) -7135 + (NN) -2557 + (LL) 23416
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -11334.0 ( -28.19 by residue)
QMean score : 0.493
|
|
|