Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVVEIVIR---NSTYKISCESGKKDHLLHLANSFNKLVSSI---SHKTGGKGSDTLNFLLAALILEDKVLELTKKLDEINQKRENYKNEKRTEYTEVLDRVNKIIECIKD
3VA7 Chain:A ((1086-1187))
---LEVIIEDNDNGKFKIDVEESIFDHKEYLA-WINENIDSIVAFQEAQGGEKADEF-----ARLIQVANAELKKS--------EEYPDDAELLYSEYTGRFWKPVAAVGD
General information:
TITO was launched using:
RESULT:
Template:
3VA7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3770 for 266 contacts (-14.2/contact) +
2D Compatibility (PS) -8753 + (NN) 1729 + (LL) 1600
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -15344.0 ( -57.68 by residue)
QMean score : 0.195
(partial model without unconserved sides chains):
PDB file :
Tito_3VA7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3VA7-query.scw
PDB file :
Tito_Scwrl_3VA7.pdb
: