Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNIEGQDFGVGLLFYNSGNPLTGVLKFINFYDENNLVLQKDQRRNRQALLDRGRLFSNYLHIKQGWCLCHNVW
4UX8 Chain:C ((312-330))
----------------NSGNDLEDCLKFLNFFKDN---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4UX8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1825 for 77 contacts (23.7/contact) +
2D Compatibility (PS) -2114 + (NN) -2188 + (LL) 3892
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -1935.0 ( -25.13 by residue)
QMean score : -0.079
(partial model without unconserved sides chains):
PDB file :
Tito_4UX8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UX8-query.scw
PDB file :
Tito_Scwrl_4UX8.pdb
: