Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQYTFRIDNKDPLYKKLIKLPTAYYRLKHDGNKHNIHSNNNVILEIGNNTNGVKLRWENDKIVLHKGSSALY
1LF1 Chain:A ((131-149))
-----------------------------------------NVIYEIANEPNGSDVTWDNQIKPYAEEVIPVI
General information:
TITO was launched using:
RESULT:
Template:
1LF1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1378 for 48 contacts (28.7/contact) +
2D Compatibility (PS) -1741 + (NN) 2292 + (LL) 2064
1D Compatibility (HY) -2000 + (ID) 500
Total energy: 1493.0 ( 31.10 by residue)
QMean score : 0.180
(partial model without unconserved sides chains):
PDB file :
Tito_1LF1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LF1-query.scw
PDB file :
Tito_Scwrl_1LF1.pdb
: