Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLSPAIFSIGPVSIHWYSLAYVLGIVFAYWHLHKLDEQKIFTKNFYDSLLTATII----GIILGGRLGFVLIYDPISYINNPIEILKTWKGGMSFHGGAIGVLCAVIISCRRYNIPIFYTLDLISCGVPIGLF-LGRIGNFVNGELFGRVTTMP-------WGMVFPESGDNLLRHPSQLYEAFFEGLLFFAIANSLFFLTRIRLYHGTLTGIAVIWYGTVRFVVEFFREPDYQVGYLWLDLTMGQLLSIFMTLLGIIVYLSALNSKFNTKSVA |
| 1A4U Chain:A ((70-244)) | -------------------------------------ESKKLLKKIFDQLKTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKAIEANKNGAIWKLDL--GTLEAIEWTKHWDSHI--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113800 for 1202 contacts (-94.7/contact) +
2D Compatibility (PS) -16256 + (NN) 5924 + (LL) 8488
1D Compatibility (HY) -3200 + (ID) 2000
Total energy: -120844.0 ( -100.54 by residue)
QMean score : 0.067
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