Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVIAENRKARFEYFILEEFEAGMVLLSSEVKSLRER-KVNISDAYVTEKNGEIWLHNMHIAEYKAANKKKHKPKRERKLLLHKKEINKLISQIKTAGVTIVPLSIYF-NDKGLVKTRIAIVKGKKLYDKRATIKQREWNRAKSRLSKNNL
1P6V Chain:A ((9-130))
---IAENKEAKAKYDILETYEAGIVLKGSEVKSLREKGTVSFKDSFVRIENGEAWLYNLYIAPYKHA---NHDPLRKRKLLLHKREIMRLYGKVQEKGYTIIPLKLYWKNNK--VKVLIALAKGKKL------------------------
General information:
TITO was launched using:
RESULT:
Template:
1P6V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65291 for 824 contacts (-79.2/contact) +
2D Compatibility (PS) -12162 + (NN) 2991 + (LL) 2208
1D Compatibility (HY) -12800 + (ID) 3300
Total energy: -88354.0 ( -107.23 by residue)
QMean score : 0.412
(partial model without unconserved sides chains):
PDB file :
Tito_1P6V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P6V-query.scw
PDB file :
Tito_Scwrl_1P6V.pdb
: