Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLFDCLIIFIIVVCIIISITRGFIKELCALMFLFLSAFLTANHYDFFTINYSKYFNSKAMQNIFSTISVFIIFNLIFMIVNNWLMYILTPIRLGLIDRVTGTFVGALRGVLLSYVLFFAMHLYCYTVHDKKEEQSKIEAEDILPNWIINSYSYQALFATVEDIVDVYVPESLILKIKEIGEGMANQEKLKGDKKEE
3J2W Chain:E ((9-40))---------------------------------------------------------------------------------------ISTTAMSWVQKITGGVGLIVAVAALILIVVLCVSFSRH-----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3J2W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8493 for 119 contacts (-71.4/contact) +
2D Compatibility (PS) -3282 + (NN) -82 + (LL) 15660
1D Compatibility (HY) -3600 + (ID) 150
Total energy: 53.0 ( 0.45 by residue)
QMean score : -0.228

(partial model without unconserved sides chains):
PDB file : Tito_3J2W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J2W-query.scw
PDB file : Tito_Scwrl_3J2W.pdb: