Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHSSNDETKKKHEIDDLPKFFKEKSKEIGKAFSNKVVEISIIRSISVTSDEQEFSFKLRLLTIVDKDTHSIWILR
4LMA Chain:A ((229-265))
-----------------------KIQGIGAGFIPEVLRTDLIDEVITVSDEEAFQFGRRLAKEEGLLSGISSGAN
General information:
TITO was launched using:
RESULT:
Template:
4LMA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4138 for 130 contacts (31.8/contact) +
2D Compatibility (PS) -3726 + (NN) 897 + (LL) 1120
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -1021.0 ( -7.85 by residue)
QMean score : -0.115
(partial model without unconserved sides chains):
PDB file :
Tito_4LMA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LMA-query.scw
PDB file :
Tito_Scwrl_4LMA.pdb
: