Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEELLNEIPLLEDKAVFEIESASSLQDLEKVRLSYLGRKGVIKAYFDDLRKVEDTEKKRDLGAIINVLRNKLDQLIMNKESILKAEEVNFKLQNEAIDITLPVRPEKIGRAHPLSKVMNEVKLIFAHMGFRAVNGPDIEDEFHVFDALNTPSHHPAREEQDTFYLKNKINDKRMMLRTHTSSMQIRAMKKAKTFPIKIVAAGRVYRNDFDATHTPMFHQMEGLYVNENVNMGQLKFTIHHFLNKFFGDKELKIRFRNSFFPFTEPSAEVDISYKESKWIEVLGCGIVHPNVFQNVGIDHTKYSGFAFGIGIERLAMLKYQISDLRNFYDNKISWLSHYGFHFSSLR |
| 3PCO Chain:A ((86-326)) | -------------------------------------------------------------------------------------------RLAAETIDVSLPGRRIENGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWF-----DTTRLLRTQTSGVQIRTMK-AQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNISFTNLKGTLHDFLRNFF-EEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PCO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149900 for 1893 contacts (-79.2/contact) +
2D Compatibility (PS) -24999 + (NN) -6387 + (LL) 7952
1D Compatibility (HY) -27600 + (ID) 6750
Total energy: -207684.0 ( -109.71 by residue)
QMean score : 0.456
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