Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIISDKVRQILSYYESENPGVRANLTRILMHGKLGGTGKLVILPVDQGFEHGPIKSFEVNPHAYDPHYHFQLAIDSGVSAYAAPLGMIEAGASTYAGMLPHILKLNSSNSLHSKSLTSDQAVTASVKDALRLGCTAVGFTIYPGSAKCFDMIEEARKIIAEAKSYGLAVVLWSYPRGEGISKEGETAVDVIAYAAHIAALLGANIIKVKLPTNHLEKEKIEAGNIKSLSKRIEYVKKSCFAGKRIVVFSGG-ESKSVNDIYNEAKEIKQGGGNGSIIGRNTFQRKKEEALSMLKDIMDIYT |
1OJX Chain:A ((3-250)) | -----------------------NLTEKFLR-IFARRGKSIILAYDHGIEHGP-ADFMDNPDSADPEYILRLARDAGFDGVVFQRGIAE---KYYDGSVPLILKLNGKTTLYNGEPVS--VANCSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVWSYPRGGKVVN--ETAPEIVAYAARIALELGADAMKIKY-----------TGDPKTFSWAVK------VAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRR--DALKFARALAELVY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OJX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149349 for 2170 contacts (-68.8/contact) +
2D Compatibility (PS) -27649 + (NN) -16847 + (LL) 3176
1D Compatibility (HY) -16800 + (ID) 4850
Total energy: -212319.0 ( -97.84 by residue)
QMean score : 0.542
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