Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKIIEIRAPKTLGGESITEGVIKIKKSIGEAIEVDDLIFEIETDKTALELTAEASGQITEFLVSEGDVISPDQLLAKLSVGEVKKEDKSENLAKRDAPSARKIMEENAISTESVKGTGMGSRITKADVIDHMRKAEQPTIKQYELPKSAASGERREERVKMSKIRQVIAARLKASQNTAAILTTFNEIDMKNVIDLRAKYKETFEKKYGIKLGFMSFFIKAAVQALREIPEINAEISGDEIIYKRYYDIGVAVGTNKGLVVPAIRNADQMSFAEIELTLADLGKKAREGKLQVSEMEDATFTISNGGVYGSLLSTPIINPPQSGILGMHSIQNRPFAVGNSIEIRPMMYIALSYDHRIIDGKGAVTFLVKIKNYIEDPNRLVLEV |
| 1C4T Chain:A ((2-230)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------RSEKRVPM---RKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMSTPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C4T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129992 for 1696 contacts (-76.6/contact) +
2D Compatibility (PS) -24721 + (NN) -13259 + (LL) 11512
1D Compatibility (HY) -29600 + (ID) 6300
Total energy: -192360.0 ( -113.42 by residue)
QMean score : 0.493
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