Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILAIDTVGTGGSSIAIIDHDGNCFVEHNSISNSHAESFFQILNTLFNKHNYNYSKLDHLAVVVGPGSFNGIRVGISAAKGINLVTNKPLYGVNALEVQAYAMSLLCANNKKNIRAMIKSSQGFYMQLFDCNLLPLSDPTTTHDAQCLGTRTSGNNYITYMDCNLPKLDASHAGLLVHYRLKNKQKLNEVEALYLNELQYMKLL
5BR9 Chain:A ((11-108))
-TLLALDT-STEACSVALL-HEGRALSHYEVIPRLHAQRLLPMVRDLLDEAGVALSAVDAIAFGRGPGAFTGVRIAIGVVQGLAFALQRPVLAVSDLAILAQRAYREQGAERVAAAIDARMDEVYWGCYQLQQGEMRLAGSEAVLPPERVAVPWDAAAADWFGAGTGWGYVERMPQRPVALDASLLPHAEDLLSLAGFAWARGEG
General information:
TITO was launched using:
RESULT:
Template:
5BR9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60207 for 698 contacts (-86.3/contact) +
2D Compatibility (PS) -10615 + (NN) -3671 + (LL) 324
1D Compatibility (HY) -10000 + (ID) 1400
Total energy: -85569.0 ( -122.59 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_5BR9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5BR9-query.scw
PDB file :
Tito_Scwrl_5BR9.pdb
: