Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAHCYIKKLKLSNFRNHLNFELDSDDSSVVIIGKNGIGKTNILEAISLLAKSNGMKKAKASEMQNRFSNKDWAVHYDFFNGADLNSIGIAKSFNKKLIQIGGKMQSSYSSLYRISNVIWLIPQMDYILLNSPSDRLKFLDRIVSLFEENYACYYMRYRKAKRERGRLLRENILNKSWLSSL-ENIMAVNAVNILDMRLSVLKMLQDTINSYSTQFFPKVSLKFNSQLTLSDTAKYFQNRLRENREKDSLTGRITFCVNNDKFQVFCQRRDLPI-NLCSTGEQKLLLLSIILSSVKARCIHYNKAPLLLLDDIMSHLDKYYRKVLIEEMLSIRCQAWITDVDQNNFGNYIDYFKTIEL |
| 2O5V Chain:A ((13-329)) | -------------NYRNLAPGTLNFPEGVTGIYGENGAGKTNLLEAAYL--ALTGQTDAPRIEQLIQAGETEAYVRADLQQGGSLSIQEVGLGRGRRQLKVDG-VRARTGDLPR-GGAVWIRPEDSELVFGPPSGRRAYLDSLLSRLSARYGEQLSRYERTVSQRNAALRG---GEEWAMHVWDDVLLKLGTEIMLFRRRALTRLDELAREANAQLGSRKTLALT--LTESTSPETYAADLRGRRAEELARGSTVTGPHRDDLLLTLG--DFPASDYASRGEGRTVALALRRAELELLREKFGEDPVLLLDDFTAELDPHRRQYLLDLAASV-PQAIVTGTELAPGAALTLRAQAGRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2O5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129621 for 2463 contacts (-52.6/contact) +
2D Compatibility (PS) -33893 + (NN) -12005 + (LL) 2688
1D Compatibility (HY) -2800 + (ID) 3700
Total energy: -179331.0 ( -72.81 by residue)
QMean score : 0.425
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