Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELAVGNNAPDFSLPTDSGENLSLSDFFDKKNIVLYFYPKDDTPGCTLEAKGFRDKINDFSSLDTVIIGASRDSIKCHASFKAKYSLPFYLISDENAKMLEKYGVWVEKSMFGKKYMGIERTTFLIDKKDKIVRIW-ENVKVSGHVNEVLEAVKKI
3DRN Chain:A ((2-147))
--VKVGDKAPLFEGIADNGEKISLSDYIGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYG--------AKGFILPARITFVIDKKGIIRHIYNSQMNPANHVNEALKALKQI
General information:
TITO was launched using:
RESULT:
Template:
3DRN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63466 for 1159 contacts (-54.8/contact) +
2D Compatibility (PS) -15622 + (NN) -7306 + (LL) 1332
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -102312.0 ( -88.28 by residue)
QMean score : 0.475
(partial model without unconserved sides chains):
PDB file :
Tito_3DRN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DRN-query.scw
PDB file :
Tito_Scwrl_3DRN.pdb
: