Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTISPILPVYSPININFSYGKGIYLYNIDGKRYIDFHSGIAVSSLGHTNLQLTSVLNLQGERLWHISNTYNIPTANNFAEKLINNSFAD-TVFFANSGSEAVECGLKIARVYQNGKGNKNRYRILTFHGAFHGRTFLTCATNDKRKFSELLNPYIDWCDNIEPN-IESVKKAISNDIGVMLIEPIQGQGGIKVMNDAFMKELRKLCDENDILLFFDCIQCGTGRTGKLFAYEHIGVKPDICALAKGIGGGFPLGVCLATEKAAQYITVGMHGSTFGGNPLATSVGNAVLDKLLSPGFLGNVEIRGKHLKNKLEDLASKFPIIEEVRGKGLMLGIKVKMDNQKFAGELSHRGLLTVGATSDNVVRIFPPLIITEKEIDEGIEILTQYLSEKSSDPYQYER |
| 2EH6 Chain:A ((7-375)) | ---------YARLPVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKG-KNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALAKGLGGGVPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV--EKLLPHVREVGNYFKEKLKELGKG-----KVKGRGLMLGLELERECKDYVLKALEKGLL-INCTAGKVLRFLPPLIIQKEHIDRAISVLREIL------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2EH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -246427 for 3260 contacts (-75.6/contact) +
2D Compatibility (PS) -39461 + (NN) -15331 + (LL) 1728
1D Compatibility (HY) -33600 + (ID) 7750
Total energy: -340841.0 ( -104.55 by residue)
QMean score : 0.483
|
|
|