Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRKIRNLKGAYKIREFLEEKLKNIGDNIAASSVDDEDVGATTSSKKKKPATGKPTEQVILQIDDKLELGSKPDLRDSPRLS
1Z5A Chain:A ((244-269))
----INNLKRDYTIKEFLVNEFQSIGDTTADKILELAGLKPNKKVKNLTEEEITRLVETFKKYEDFRSPSADSLSVIGEDLI
General information:
TITO was launched using:
RESULT:
Template:
1Z5A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2531 for 113 contacts (-22.4/contact) +
2D Compatibility (PS) -2822 + (NN) -1258 + (LL) 576
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -9485.0 ( -83.94 by residue)
QMean score : 0.467
(partial model without unconserved sides chains):
PDB file :
Tito_1Z5A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z5A-query.scw
PDB file :
Tito_Scwrl_1Z5A.pdb
: