Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSRVKVNKDNKNANSGKQARFDLNRMNFMINGKIVDKEYIIRLYGENNYLIPNGSEDYRLFAKRVFTGMFEYAKAEVPNN-RILEKLVINCNQAGYEFAIYE
3D5H Chain:A ((92-151))
-----------------------------------------LAVYLFNNFLLPPGHSENRPFGNAVLDGIDFHIEHGGPSQYQLLANILSSFRLAGTEFALTA
General information:
TITO was launched using:
RESULT:
Template:
3D5H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18354 for 309 contacts (-59.4/contact) +
2D Compatibility (PS) -5930 + (NN) -652 + (LL) 2528
1D Compatibility (HY) -4000 + (ID) 850
Total energy: -27258.0 ( -88.21 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_3D5H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3D5H-query.scw
PDB file :
Tito_Scwrl_3D5H.pdb
: