Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMENLAYKLIKVTEAAALAAYKLVGLGDEKKADQVAVDAMRTVLNSMEINGTIVIGEGERDKAPMLYVGEKVGTGNGPEIDIAVDPLEGTTICAHYKQSAMSVLAAAKKGDFLHAPDIYMEKIAIGKDLPIGVVSLKNSVEKNFDNLAQAKKCEVNDLTVTILKRERHNNLILKIRKLGARVKLIDDGDIAA--IVSLINGSHDIYIGIGGAPEGVLAAAALSSIGGQMEGRLIFDTHQSKERAKILNIDDLEKIYSIKDMVKGESV-FIATGVTSGELVDGVKFGYNICSTSSLIMLHNKVIKLQTIQNLC
1NI9 Chain:A ((7-323))---LAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIMLNQVNIDGTIVIGEG---EAPMLYIGEKVGTGRGDAVDIAVDPIEGT------QANALAVLAVGDKGCFLNAPDMYMEKLIVGPGAK-GTIDLNLPLADNLRNVAAALGKPLSELTVTILAK--HDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSAAVIRALDGDMNGRLLA------------GI-EAGKVLRLGDMARSDNVIFSATGITKGDLLEGISRKGNIATTETL-LIRGKSRTIRRIQSIH


General information:
TITO was launched using:
RESULT:

Template: 1NI9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -163311 for 2434 contacts (-67.1/contact) +
2D Compatibility (PS) -30525 + (NN) -13584 + (LL) 2456
1D Compatibility (HY) -26000 + (ID) 6550
Total energy: -237514.0 ( -97.58 by residue)
QMean score : 0.550

(partial model without unconserved sides chains):
PDB file : Tito_1NI9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NI9-query.scw
PDB file : Tito_Scwrl_1NI9.pdb: