Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFAVEQAKLAKKNDEIPIGAVIVSGDNIISFAHNIS---NDPTAHAEMLVIRQACELLSTSVLCNADMYVTLEPCPMCAQAISFARIKRLYFGAYNSKGGGIENGAKIFQ--FCSHVPEVYGGVLETECSFLLKDFFEKLRDSTNYY
2A8N Chain:A ((8-131))
MELALVEARSAGERDEVPIGAVLVLDGRVIARSGNRTRELNDVTAHAEIAVIRMACEALGQERLPGADLYVTLEPCTMCAAAISFARIRRLYYGAQDPKGGAVESGVRFFSQPTCHHAPDVYSG------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A8N.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95134 for 1004 contacts (-94.8/contact) +
2D Compatibility (PS) -13226 + (NN) -10257 + (LL) 1888
1D Compatibility (HY) -10000 + (ID) 3300
Total energy: -130029.0 ( -129.51 by residue)
QMean score : 0.454
(partial model without unconserved sides chains):
PDB file :
Tito_2A8N.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A8N-query.scw
PDB file :
Tito_Scwrl_2A8N.pdb
: