Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLSVSIMDLIPIQRGPKNWLKDKGEEILNLVRNYKKISDQKLRKIFYLLIKSAQLSKKSSRKVEIIEIAKNLFKAGISINIISQITGLSTDRIA
1C3Y Chain:A ((22-50))
------------------------EESLNKVRNREEVDDPKLKEHAFCILKRAGFIDASGEFQLDHIKTKFKENSEHPEKVDDLVAKCAVKKDT
General information:
TITO was launched using:
RESULT:
Template:
1C3Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9884 for 127 contacts (-77.8/contact) +
2D Compatibility (PS) -3114 + (NN) -2251 + (LL) 1404
1D Compatibility (HY) -1200 + (ID) 600
Total energy: -15645.0 ( -123.19 by residue)
QMean score : 0.396
(partial model without unconserved sides chains):
PDB file :
Tito_1C3Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C3Y-query.scw
PDB file :
Tito_Scwrl_1C3Y.pdb
: