Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVMNTYAKSGVDLKLYNKLMKEVKLVVDENKREEVISEVGSFSALFDFAALSKKYDHPVLVSSTDGVGTKLLIAQEVDKHDTIGIDLVAMCVNDLLAQGATPLFFLDYFATGALNKDVLLSVVQGITEGCKQAKITLVGGETAEMPGMYGNNHYDLAGFVVGVVDKSKILPNYGVMRAGDYIVGLESSGIHSNGFSLVRHIFEDLGISYNDLSPWDNQLWGEVLLKPTKIYVDSLLPIMSQ--VKGIAHITGGGLIDNVPRILPKNLFADVDISSLEWPDIFLWLTKEGKVEKREMLRTFNCGIGMILIIDPENMQGVKNHFQKLGEKIEIIGKLNEKYNPSFNGVVS |
1CLI Chain:A ((8-308)) | ----SYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGGFGAL---CALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEPLFFLDYYATGKLDVDTASAVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFCVGVVEKSEIIDGSKV-SDGDVLIALGSSGPHSNGYSLVRKILEVSGCDPQ-TTELDGKPLADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQWPEVFNWLQTAGNVEHHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAWKIGIIKASDSEQRVVIE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CLI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216005 for 2493 contacts (-86.6/contact) +
2D Compatibility (PS) -31712 + (NN) -12457 + (LL) 772
1D Compatibility (HY) -34000 + (ID) 8100
Total energy: -301502.0 ( -120.94 by residue)
QMean score : 0.467
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