Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFEWNTNNIIDATGGRGKSGCHNLNISTDTRNIKKGDLFIALKGKNFDGHDFLHEAFLKGAAAAVVSED-KYRNLPVIVVQDTLKALHDMASYYIRNVLVNAEVIAITGSVGKTTTKDMLHTVL-SQYGVSH---VNDGNLNNNIGLPLTILKAPENCRYLILEMGMNKAGEIKELSKISNPNIAVITNIEPVHVENFSSLFDIAQAKLEILYGVKNNGTLILNKDNKYYDYLLSHVD-RDVVSFGRSESATVCLLNVIKNDKGLNLKIRLNN-NQIMNCNLCVQGKHFVYSVLAVVAVIQNLGLNLSKLPLALENFNITKGRGSVHKAKYNGKCIHLIDDSYNASPASMKAAIRTLGIYSNRRKVALLGDMLELGNKSITFHMKLLDSIVKYDVDKVYTVGKFMLKLHRLLPGNIKGTHFNDSNQLKSNLANIVQNNDVVLVKGSRGVKMDFIVQGFIIEY |
| 4CVK Chain:A ((28-447)) | -------------------------VSTDSRAIGPGELFIALSGPRFDGHDYLAEVAAKGAVAALVEREVA-APLPQLLVRDTRAALGRLGALNRRKF--TGPLAAMTGSSGKTTVKEMLASILRTQAGDAESVLATRGNLNNDLGVPLTLLQLAPQHRSAVIELGASRIGEIAYTVELTRPHVAIITNA-------FGGPEKIVEAKGEILEGLAADGTAVLNLDDKAFDTWKARASGRPLLTFSLDRPQADFRAADLQRDARGCMGFRLQGVAGEAQVQLNLLGRHNVANALAAAAAAHALGVPLDGIVAGLQALQPVKGRAV---AQLTASGLRVIDDSYNANPASMLAAIDILSGFSG-RTVLVLGDMG-----AEQAHRE-VGAYAAGKVSALYAVGPLM--AHAVQAFGATGRHFADQASLIGALAT-EDPTTTILIKGSRSAAMDKVVAALC--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -287342 for 3438 contacts (-83.6/contact) +
2D Compatibility (PS) -42941 + (NN) -14461 + (LL) 2572
1D Compatibility (HY) -16000 + (ID) 7350
Total energy: -365522.0 ( -106.32 by residue)
QMean score : 0.479
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