Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRSAWKPPFCHPSVLRLVNRALKQGSINKVIKIHSRASVILPNCLGLKFAVYNGKDYIPVSVNDQNMIGHKFGEFSPTRKFAGHNGDKKAVRR
4ADV Chain:S ((2-80))
--RSLKKGPFIDLHLLKKVEKAVESGD-KKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVTDE-MVGHKLGEFAPTRTYR-----------
General information:
TITO was launched using:
RESULT:
Template:
4ADV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67458 for 508 contacts (-132.8/contact) +
2D Compatibility (PS) -8502 + (NN) -4816 + (LL) 512
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -88064.0 ( -173.35 by residue)
QMean score : 0.511
(partial model without unconserved sides chains):
PDB file :
Tito_4ADV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ADV-query.scw
PDB file :
Tito_Scwrl_4ADV.pdb
: